STRINGSTRING
PP1S138_171V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S138_171V6.1" - Predicted protein in Physcomitrella patens
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S138_171V6.1Predicted protein (1027 aa)    
Predicted Functional Partners:
PP1S81_43V6.1
Annotation not available (933 aa)
     
 
  0.633
PP1S34_210V6.1
Annotation not available (747 aa)
     
 
  0.633
PP1S165_124V6.1
DIS3-like exonuclease 2 ; 3’-5’-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3’ end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3’ (1567 aa)
     
 
  0.633
PP1S68_101V6.1
Predicted protein (1049 aa)
     
   
  0.583
PP1S293_80V6.1
Predicted protein (828 aa)
     
   
  0.521
PP1S2633_1V6.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (701 aa)
           
  0.508
PP1S197_70V6.1
Predicted protein (482 aa)
     
   
  0.504
PP1S41_292V6.1
Predicted protein (956 aa)
       
 
  0.497
PP1S14_277V6.1
Predicted protein (973 aa)
       
 
  0.497
PP1S59_317V6.1
Predicted protein (618 aa)
     
 
  0.493
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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