• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S138_176V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S138_176V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S138_176V6.1Predicted protein (2032 aa)    
Predicted Functional Partners:
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
   
 
  0.978
PP1S88_186V6.1
Predicted protein (1189 aa)
   
 
  0.968
PP1S81_123V6.1
Predicted protein (1194 aa)
   
 
  0.968
SDG1506
annotation not available (2067 aa)
     
 
  0.957
SDG1508.1
Histone-lysine N-methyltransferase-like protein (1402 aa)
     
 
  0.957
PP1S100_146V6.1
Polycomb group protein (999 aa)
     
 
  0.953
PP1S61_39V6.1
Predicted protein (2124 aa)
     
 
  0.951
PP1S54_136V6.1
annotation not available (1001 aa)
   
 
  0.946
PGE1501
Transcriptional repressor EED/ESC/FIE (376 aa)
       
 
  0.940
PP1S6_395V6.3
Predicted protein (206 aa)
   
 
  0.940
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]