STRINGSTRING
PP1S138_50V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S138_50V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S138_50V6.1Annotation not available (777 aa)    
Predicted Functional Partners:
PP1S247_16V6.1
Annotation not available (743 aa)
       
  0.912
PP1S46_256V6.1
Annotation not available (175 aa)
   
  0.860
PP1S104_116V6.1
Annotation not available (314 aa)
   
  0.860
ppabcg23
ATP-binding cassette transporter, subfamily G, member 23, group PDR protein PpABCG23 (1397 aa)
   
0.792
PP1S358_27V6.1
Annotation not available (540 aa)
   
0.789
ppabcg22
ATP-binding cassette transporter, subfamily G, member 22, group PDR protein PpABCG22 (1487 aa)
   
0.786
PP1S358_28V6.1
Annotation not available (418 aa)
   
0.785
ppabcg42
ATP-binding cassette transporter, subfamily G fragment, member 42, group PDR-like protein PpABCG42 (807 aa)
   
0.785
PP1S23_135V6.1
Annotation not available (1499 aa)
   
0.785
ppabcg21
ATP-binding cassette transporter, subfamily G, member 21, group PDR protein PpABCG21 (1497 aa)
   
0.785
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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