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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
MSCL12 protein (Physcomitrella patens) - STRING interaction network
"MSCL12" - MscS-Like mechanosensitive ion channel MSCL12 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSCL12MscS-Like mechanosensitive ion channel MSCL12 (1003 aa)    
Predicted Functional Partners:
MSCL11
MscS-Like mechanosensitive ion channel MSCL11 (582 aa)
           
  0.532
PP1S14_84V6.1
Predicted protein (227 aa)
     
   
  0.531
PP1S158_76V6.1
annotation not available (1094 aa)
           
  0.525
PP1S132_63V6.1
Predicted protein (1121 aa)
           
  0.525
PpLFY2
FLORICAULA/LEAFY homolog 2; Predicted protein (349 aa)
           
  0.522
PPLFY1
FLORICAULA/LEAFY homolog 1; Predicted protein (348 aa)
           
  0.522
PP1S117_181V6.1
annotation not available (506 aa)
           
  0.507
PP1S117_170V6.1
annotation not available (427 aa)
           
  0.507
PP1S88_1V6.2
Predicted protein (696 aa)
           
  0.505
PP1S263_3V6.1
Predicted protein (696 aa)
           
  0.505
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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