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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
CalS9 protein (Physcomitrella patens) - STRING interaction network
"CalS9" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CalS9annotation not available (1995 aa)    
Predicted Functional Partners:
CPC1504
Structural maintenance of chromosomes protein (1196 aa)
     
        0.555
PP1S303_45V6.1
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (845 aa)
     
   
  0.540
PP1S28_394V6.2
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (836 aa)
     
   
  0.540
PP1S120_66V6.1
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (945 aa)
     
   
  0.540
PP1S32_218V6.1
annotation not available (275 aa)
     
   
  0.519
SYP6A2
Qc-SNARE, SYP6/Tlg1p/Syntaxin 6 family (238 aa)
           
  0.499
SYP61A1
Qc-SNARE, SYP6/Tlg1p/Syntaxin 6 family (241 aa)
           
  0.499
PP1S302_56V6.1
annotation not available (1177 aa)
     
 
  0.444
PP1S42_270V6.1
annotation not available (399 aa)
           
  0.440
PP1S332_42V6.2
Predicted protein; Belongs to the cytochrome P450 family (554 aa)
           
  0.440
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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