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STRINGSTRING
PP1S13_307V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S13_307V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S13_307V6.1annotation not available (1143 aa)    
Predicted Functional Partners:
PP1S17_107V6.1
Predicted protein (433 aa)
       
      0.831
PP1S41_228V6.1
Predicted protein (362 aa)
       
      0.620
PP1S215_91V6.1
Predicted protein (353 aa)
       
      0.620
PP1S103_75V6.1
Predicted protein (350 aa)
       
      0.620
PP1S584_9V6.3
Inositol-tetrakisphosphate 1-kinase; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3; Belongs to the ITPK1 family (416 aa)
       
      0.618
PP1S46_310V6.3
Inositol-tetrakisphosphate 1-kinase; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3; Belongs to the ITPK1 family (327 aa)
       
      0.618
PP1S251_85V6.1
Inositol-tetrakisphosphate 1-kinase; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3; Belongs to the ITPK1 family (417 aa)
       
      0.618
PP1S11_333V6.1
Inositol-tetrakisphosphate 1-kinase; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3; Belongs to the ITPK1 family (334 aa)
       
      0.618
PP1S119_8V6.1
Inositol-tetrakisphosphate 1-kinase; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3; Belongs to the ITPK1 family (332 aa)
       
      0.618
PP1S28_194V6.1
annotation not available (776 aa)
           
  0.604
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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