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GTF1502.2 protein (Physcomitrella patens) - STRING interaction network
"GTF1502.2" - TATA-box binding protein, component of TFIID and TFIIIB in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF1502.2TATA-box binding protein, component of TFIID and TFIIIB (265 aa)    
Predicted Functional Partners:
PP1S79_74V6.1
Predicted protein (324 aa)
   
  0.987
PP1S307_70V6.1
Predicted protein (149 aa)
       
  0.987
PP1S54_134V6.1
Annotation not available (544 aa)
     
  0.986
PP1S93_68V6.1
Predicted protein (422 aa)
   
  0.986
PP1S147_86V6.1
Predicted protein (311 aa)
     
  0.986
TAFV1501
TFIID and SAGA complex subunit (673 aa)
     
  0.986
PP1S519_2V6.1
Predicted protein (178 aa)
     
  0.985
PP1S303_26V6.1
Predicted protein (499 aa)
       
  0.985
PP1S34_263V6.1
Predicted protein (311 aa)
     
  0.985
PP1S190_89V6.1
Predicted protein (943 aa)
     
  0.984
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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