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PHY5c protein (Physcomitrella patens) - STRING interaction network
"PHY5c" - Phytochrome 5c in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHY5cPhytochrome 5c; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1124 aa)    
Predicted Functional Partners:
PP1S69_37V6.1
Predicted protein (728 aa)
     
  0.955
PP1S68_85V6.1
Predicted protein (702 aa)
     
  0.955
PP1S44_240V6.1
Annotation not available (1095 aa)
 
 
0.947
PP1S60_107V6.1
Predicted protein (665 aa)
   
 
  0.940
PP1S362_27V6.1
Predicted protein (738 aa)
   
  0.910
PP1S75_175V6.1
Predicted protein (720 aa)
     
  0.901
PP1S283_76V6.1
Predicted protein (726 aa)
     
  0.901
PP1S165_33V6.1
Predicted protein (732 aa)
     
  0.901
PP1S2675_1V6.1
Predicted protein (326 aa)
   
 
  0.887
PP1S31_291V6.1
Predicted protein (552 aa)
   
 
  0.870
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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