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STRINGSTRING
PP1S13_431V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S13_431V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
PP1S13_431V6.1annotation not available (123 aa)    
Predicted Functional Partners:
PP1S4979_1V6.1
Arginase; Belongs to the arginase family (299 aa)
         
  0.626
PP1S72_148V6.1
Predicted protein; Belongs to the arginase family (355 aa)
   
   
  0.620
PP1S85_39V6.1
annotation not available (595 aa)
     
 
  0.603
PP1S19_126V6.1
annotation not available (130 aa)
     
 
  0.603
PP1S432_10V6.1
Predicted protein (577 aa)
   
 
  0.532
PP1S18_147V6.1
annotation not available (566 aa)
   
 
  0.532
PP1S1_661V6.3
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 Methylthioribulose-1-phosphate dehydratase Enolase-phosphatase E1; In the C-terminal section; belongs to the HAD-like hydrolase superfamily. MasA/MtnC family (505 aa)
         
  0.524
PP1S209_59V6.3
Uricase; Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin; Belongs to the uricase family (297 aa)
     
   
  0.518
ALDH5B
SSADH ; Belongs to the aldehyde dehydrogenase family (492 aa)
   
   
  0.478
ALDH12A
Mitochondrial P5CDH (571 aa)
   
   
  0.478
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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