STRINGSTRING
PP1S13_90V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S13_90V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S13_90V6.1Predicted protein (709 aa)    
Predicted Functional Partners:
PP1S60_307V6.1
Predicted protein (347 aa)
     
  0.943
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
  0.936
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
   
  0.936
PP1S245_32V6.2
Predicted protein (322 aa)
     
  0.935
PP1S1_402V6.1
Annotation not available (744 aa)
     
  0.935
PP1S61_57V6.1
Predicted protein (106 aa)
     
 
  0.912
PP1S317_15V6.1
Predicted protein (111 aa)
     
 
  0.912
PP1S130_285V6.1
Predicted protein (241 aa)
       
 
  0.890
PP1S34_215V6.2
Predicted protein (467 aa)
     
 
  0.881
PP1S68_188V6.1
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (236 aa)
       
  0.852
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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