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PP1S140_172V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S140_172V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S140_172V6.1Predicted protein; Nucleoside N-ribohydrolase 2 (326 aa)    
Predicted Functional Partners:
PP1S131_4V6.1
Predicted protein (297 aa)
   
  0.979
PP1S40_57V6.1
Predicted protein (426 aa)
       
  0.963
PP1S294_50V6.1
Predicted protein (428 aa)
       
  0.963
PP1S2_34V6.1
Predicted protein; Cytidine deaminase (325 aa)
   
 
  0.963
PP1S83_234V6.4
Uridine kinase ; Belongs to the uridine kinase family (530 aa)
   
  0.961
PP1S488_8V6.1
Uridine kinase ; Belongs to the uridine kinase family (520 aa)
   
  0.961
PP1S370_24V6.1
Predicted protein; Uridine kinase (486 aa)
   
  0.961
PP1S19_94V6.1
Uridine kinase ; Belongs to the uridine kinase family (482 aa)
   
  0.961
PP1S387_50V6.1
Predicted protein (580 aa)
       
  0.950
PP1S66_124V6.1
Predicted protein (583 aa)
     
 
  0.950
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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