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STRINGSTRING
PP1S140_18V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S140_18V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S140_18V6.1Predicted protein (238 aa)    
Predicted Functional Partners:
PP1S18_19V6.1
Predicted protein (129 aa)
     
   
  0.711
PP1S234_38V6.1
annotation not available (1163 aa)
     
   
  0.686
PP1S58_115V6.1
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis (508 aa)
           
  0.680
PP1S238_33V6.1
Predicted protein (507 aa)
     
   
  0.660
PP1S238_32V6.1
Predicted protein (391 aa)
     
   
  0.658
PP1S12_340V6.1
Predicted protein (546 aa)
     
   
  0.648
PP1S49_46V6.1
Predicted protein (422 aa)
     
   
  0.630
PP1S182_58V6.1
Predicted protein (246 aa)
     
   
  0.630
PP1S58_150V6.1
Predicted protein (433 aa)
           
  0.619
PP1S290_38V6.1
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family (517 aa)
     
   
  0.615
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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