STRINGSTRING
PP1S141_8V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S141_8V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S141_8V6.1Predicted protein (271 aa)    
Predicted Functional Partners:
PP1S98_136V6.2
Predicted protein (177 aa)
     
        0.885
PP1S90_50V6.1
Predicted protein (452 aa)
     
        0.885
PP1S87_131V6.2
annotation not available (403 aa)
     
        0.885
PP1S83_150V6.2
Predicted protein (241 aa)
     
     
0.885
PP1S71_89V6.1
Predicted protein (143 aa)
     
        0.885
PP1S71_283V6.1
Predicted protein (420 aa)
     
        0.885
PP1S55_140V6.1
Predicted protein (412 aa)
     
        0.885
PP1S54_32V6.1
Predicted protein (182 aa)
     
        0.885
PP1S53_37V6.1
Predicted protein (204 aa)
     
        0.885
PP1S43_80V6.1
Predicted protein; Belongs to the peroxidase family (358 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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