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STRINGSTRING
PP1S142_114V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S142_114V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S142_114V6.1Predicted protein (680 aa)    
Predicted Functional Partners:
PP1S6_158V6.2
annotation not available (463 aa)
   
 
  0.940
PP1S60_201V6.1
annotation not available (458 aa)
   
 
  0.940
PP1S244_58V6.1
annotation not available (385 aa)
     
 
  0.777
PP1S446_8V6.1
annotation not available (373 aa)
   
 
  0.772
PP1S34_87V6.1
Predicted protein; Belongs to the heat shock protein 70 family (780 aa)
     
 
  0.760
PP1S81_237V6.1
Predicted protein (372 aa)
   
 
  0.757
PP1S154_54V6.1
Predicted protein (371 aa)
   
 
  0.757
PP1S152_137V6.1
Predicted protein (421 aa)
   
 
  0.757
PP1S338_55V6.2
annotation not available (326 aa)
       
 
  0.741
PP1S245_25V6.1
annotation not available (327 aa)
       
 
  0.741
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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