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STRINGSTRING
PP1S142_144V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S142_144V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S142_144V6.1Predicted protein (426 aa)    
Predicted Functional Partners:
PP1S144_86V6.1
Predicted protein (473 aa)
   
  0.983
GSTZ1
Zeta class glutathione S-transferase (225 aa)
   
 
  0.979
PP1S131_193V6.1
Predicted protein (223 aa)
         
  0.976
PP1S47_242V6.1
Predicted protein (753 aa)
       
      0.853
PP1S156_74V6.1
annotation not available (373 aa)
       
      0.847
PP1S53_211V6.1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (634 aa)
   
 
  0.844
PP1S276_97V6.5
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (631 aa)
   
 
  0.844
PP1S3_646V6.1
annotation not available (1055 aa)
     
      0.843
PP1S65_246V6.1
Predicted protein (479 aa)
   
 
  0.842
PP1S36_261V6.1
Predicted protein (369 aa)
   
 
  0.842
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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