• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S142_28V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S142_28V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S142_28V6.1annotation not available (881 aa)    
Predicted Functional Partners:
PP1S5_24V6.1
annotation not available (456 aa)
       
 
  0.559
PP1S523_11V6.1
annotation not available (511 aa)
       
 
  0.559
PP1S13_42V6.1
Predicted protein (176 aa)
       
 
  0.547
PP1S51_262V6.1
Predicted protein (288 aa)
           
  0.530
PP1S126_15V6.2
Predicted protein (296 aa)
           
  0.530
PP1S184_82V6.1
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (347 aa)
           
  0.514
PP1S178_39V6.1
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (344 aa)
           
  0.514
PP1S88_186V6.1
Predicted protein (1189 aa)
   
 
  0.423
PP1S81_123V6.1
Predicted protein (1194 aa)
   
 
  0.423
PP1S170_73V6.1
Predicted protein (497 aa)
     
 
  0.411
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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