STRINGSTRING
PP1S143_140V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S143_140V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S143_140V6.1Annotation not available (134 aa)    
Predicted Functional Partners:
ppabci8
ATP-binding cassette transporter, subfamily I, member 8, ABC component protein PpABCI8 (351 aa)
 
  0.993
ppabci18
ATP-binding cassette transporter, subfamily I, member 18, ABC component protein PpABCI18 (260 aa)
 
  0.993
PP1S16_130V6.1
Annotation not available (479 aa)
 
  0.918
PP1S10_194V6.1
Predicted protein (487 aa)
 
  0.918
PP1S91_106V6.2
Predicted protein (694 aa)
   
  0.881
PP1S7_375V6.1
Uncharacterized protein (982 aa)
   
  0.881
PP1S66_143V6.1
Predicted protein (695 aa)
   
  0.881
PP1S62_221V6.1
Annotation not available (562 aa)
   
  0.881
PP1S53_102V6.1
Predicted protein (706 aa)
   
  0.881
PP1S4_485V6.1
Annotation not available (830 aa)
   
  0.881
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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