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GTA1501 protein (Physcomitrella patens) - STRING interaction network
"GTA1501" - RNA polymerase II transcription elongation factor SPT5 in Physcomitrella patens
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTA1501RNA polymerase II transcription elongation factor SPT5 (1060 aa)    
Predicted Functional Partners:
PAFC1501
Paf1 complex protein (1019 aa)
     
  0.988
GTG1501
Transcription elongation factor SPT4; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (120 aa)
       
  0.986
PAFD1501
Paf1 complex protein (642 aa)
     
  0.985
PP1S79_74V6.1
Predicted protein (324 aa)
     
  0.984
PP1S29_171V6.1
Predicted protein (546 aa)
     
  0.983
PP1S15_366V6.1
DNA-directed RNA polymerase (771 aa)
     
  0.983
PP1S29_169V6.1
DNA-directed RNA polymerase (665 aa)
     
  0.983
PP1S89_20V6.1
Predicted protein (142 aa)
       
  0.982
PP1S96_2V6.1
Predicted protein (126 aa)
     
  0.982
PP1S89_296V6.1
Annotation not available (228 aa)
     
  0.982
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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