STRINGSTRING
PP1S144_78V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S144_78V6.2" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S144_78V6.2Predicted protein (534 aa)    
Predicted Functional Partners:
PP1S25_361V6.1
Predicted protein (476 aa)
   
   
  0.911
PP1S142_119V6.1
Annotation not available (445 aa)
   
   
  0.911
PP1S209_59V6.1
Uricase; Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin (297 aa)
   
   
  0.845
PP1S83_234V6.1
Uridine kinase (530 aa)
   
   
  0.830
PP1S488_8V6.1
Uridine kinase (520 aa)
   
   
  0.830
PP1S370_24V6.1
Uridine kinase (486 aa)
   
   
  0.830
PP1S19_94V6.1
Predicted protein (482 aa)
   
   
  0.830
PP1S38_256V6.1
Predicted protein (396 aa)
   
   
  0.717
PP1S239_40V6.1
Predicted protein (401 aa)
   
   
  0.717
PP1S131_4V6.1
Predicted protein (297 aa)
   
   
  0.667
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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