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STRINGSTRING
PP1S145_130V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S145_130V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S145_130V6.1Predicted protein (557 aa)    
Predicted Functional Partners:
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
         
  0.538
PP1S149_139V6.1
Predicted protein (123 aa)
           
  0.520
PP1S133_110V6.1
Predicted protein (353 aa)
           
  0.509
PP1S192_79V6.1
Predicted protein (338 aa)
           
  0.506
PP1S57_170V6.1
Predicted protein (286 aa)
           
  0.504
PP1S15_404V6.1
Predicted protein (139 aa)
           
  0.499
PP1S99_257V6.2
Predicted protein (186 aa)
         
  0.472
PP1S184_69V6.1
Chloroplast Tha4-2 (159 aa)
         
  0.472
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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