STRINGSTRING
PP1S145_161V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S145_161V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S145_161V6.1Predicted protein (331 aa)    
Predicted Functional Partners:
PP1S13_127V6.2
Predicted protein (558 aa)
     
  0.948
PP1S116_56V6.1
Predicted protein (498 aa)
     
  0.948
PP1S313_51V6.1
Glutathione peroxidase (1252 aa)
       
  0.906
PP1S28_126V6.2
Predicted protein (593 aa)
         
  0.906
PP1S98_2V6.1
Glutathione peroxidase (170 aa)
     
  0.906
PP1S115_90V6.2
Glutathione peroxidase (257 aa)
     
  0.906
PP1S297_8V6.1
Glutathione peroxidase (184 aa)
       
  0.905
PP1S154_115V6.1
Predicted protein (657 aa)
         
  0.901
PP1S161_119V6.1
Predicted protein (196 aa)
       
      0.646
PP1S125_91V6.1
Predicted protein (137 aa)
       
      0.646
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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