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STRINGSTRING
PP1S145_173V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S145_173V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S145_173V6.1Predicted protein (388 aa)    
Predicted Functional Partners:
PP1S74_26V6.2
Predicted protein (317 aa)
   
 
  0.968
PP1S114_10V6.1
Predicted protein (260 aa)
   
 
  0.964
PP1S444_8V6.1
annotation not available (145 aa)
   
  0.964
PP1S120_79V6.1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione (254 aa)
   
  0.964
PP1S72_285V6.1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione (355 aa)
   
  0.959
PP1S54_291V6.1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione (409 aa)
   
  0.959
PP1S106_24V6.1
annotation not available (309 aa)
   
  0.959
PP1S44_301V6.1
annotation not available (540 aa)
   
 
    0.901
PP1S18_85V6.1
Predicted protein (579 aa)
   
 
    0.901
PP1S88_36V6.1
Predicted protein (443 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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