• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S145_78V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S145_78V6.1" - Signal peptidase I in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S145_78V6.1Signal peptidase I (180 aa)    
Predicted Functional Partners:
PP1S322_42V6.1
Predicted protein (97 aa)
     
 
  0.990
PP1S284_26V6.1
Uncharacterized protein (97 aa)
     
 
  0.990
PP1S371_33V6.1
Predicted protein (177 aa)
     
 
  0.987
PP1S3_457V6.1
Predicted protein (193 aa)
     
   
  0.936
PP1S353_4V6.1
Predicted protein (112 aa)
     
   
  0.936
PP1S292_15V6.1
Predicted protein (113 aa)
     
   
  0.936
PP1S73_47V6.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (441 aa)
     
   
  0.916
PP1S78_15V6.1
Predicted protein (210 aa)
     
 
  0.907
PP1S314_30V6.1
Predicted protein (210 aa)
     
 
  0.907
HEMB
Delta-aminolevulinic acid dehydratase, chloroplastic; Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity); Belongs to the ALAD family (454 aa)
     
   
  0.901
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (17%) [HD]