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STRINGSTRING
PP1S147_26V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S147_26V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S147_26V6.1Predicted protein (231 aa)    
Predicted Functional Partners:
PP1S235_137V6.1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling (189 aa)
           
  0.612
PP1S312_29V6.1
annotation not available (528 aa)
           
  0.532
PP1S23_193V6.1
annotation not available (464 aa)
           
  0.532
PP1S12_128V6.2
Predicted protein (357 aa)
           
  0.527
PP1S7_125V6.1
Uncharacterized protein (139 aa)
           
  0.523
PP1S28_127V6.1
Uncharacterized protein (141 aa)
           
  0.523
PP1S55_312V6.1
Predicted protein (316 aa)
           
  0.507
PP1S91_180V6.1
Predicted protein (559 aa)
           
  0.444
PP1S52_111V6.2
Predicted protein; Belongs to the eIF-3 subunit D family (552 aa)
           
  0.444
PP1S1_543V6.2
Uncharacterized protein; Belongs to the eIF-3 subunit D family (551 aa)
           
  0.444
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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