STRINGSTRING
PP1S147_63V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S147_63V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S147_63V6.1Annotation not available (416 aa)    
Predicted Functional Partners:
PP1S103_117V6.3
Predicted protein (397 aa)
   
        0.496
PP1S55_203V6.1
Predicted protein (412 aa)
   
          0.493
PP1S41_1V6.1
Predicted protein (396 aa)
   
        0.480
PP1S5_248V6.1
Predicted protein (259 aa)
   
        0.466
PP1S132_186V6.1
Predicted protein (304 aa)
   
        0.447
PP1S33_83V6.2
Predicted protein (230 aa)
   
          0.436
PP1S88_182V6.1
Predicted protein (298 aa)
   
          0.431
PP1S191_118V6.1
Predicted protein (299 aa)
   
          0.417
PP1S303_20V6.2
Predicted protein (296 aa)
   
          0.416
PP1S340_26V6.1
Predicted protein (258 aa)
   
          0.412
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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