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STRINGSTRING
PP1S147_86V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S147_86V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S147_86V6.1Predicted protein (311 aa)    
Predicted Functional Partners:
PP1S1_420V6.1
Uncharacterized protein (541 aa)
     
 
  0.961
PP1S328_43V6.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (114 aa)
     
 
  0.958
PP1S30_177V6.1
Uncharacterized protein (147 aa)
     
 
  0.954
PP1S89_20V6.1
Predicted protein (142 aa)
     
 
  0.953
PP1S403_37V6.1
Predicted protein (56 aa)
   
 
  0.953
GTF1502.1
TATA-box binding protein, component of TFIID and TFIIIB (211 aa)
     
 
  0.953
GTF1502.2
TATA-box binding protein, component of TFIID and TFIIIB (265 aa)
     
 
  0.953
PP1S54_240V6.1
Predicted protein (483 aa)
     
 
  0.951
PP1S197_12V6.1
Predicted protein (145 aa)
     
 
  0.951
PP1S1_770V6.1
RNA polymerase II transcription factor B subunit 2; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (462 aa)
     
 
  0.948
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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