STRINGSTRING
PP1S148_83V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S148_83V6.2" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S148_83V6.2Annotation not available (1118 aa)    
Predicted Functional Partners:
PP1S51_99V6.1
Predicted protein (205 aa)
       
      0.638
PP1S30_355V6.1
Predicted protein (207 aa)
       
      0.638
PP1S257_28V6.1
Predicted protein (207 aa)
       
      0.638
PP1S126_63V6.1
Predicted protein (204 aa)
       
      0.638
PP1S25_361V6.1
Predicted protein (476 aa)
     
   
  0.531
PP1S142_119V6.1
Annotation not available (445 aa)
     
   
  0.531
PP1S131_157V6.1
Predicted protein (459 aa)
     
   
  0.467
PP1S65_215V6.1
Predicted protein (1949 aa)
     
        0.465
PP1S36_196V6.1
Predicted protein (1893 aa)
     
        0.465
PP1S26_208V6.1
Predicted protein (1569 aa)
     
        0.465
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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