STRINGSTRING
PP1S148_87V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S148_87V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S148_87V6.1Predicted protein (460 aa)    
Predicted Functional Partners:
PP1S44_316V6.1
Annotation not available (247 aa)
       
  0.972
PP1S274_75V6.2
Annotation not available (245 aa)
       
  0.972
PP1S10_176V6.1
Predicted protein (246 aa)
       
  0.972
ARP1507
Actin related protein Arp2 subunit (391 aa)
       
    0.737
PP1S222_6V6.1
Predicted protein (1050 aa)
     
      0.627
PP1S88_186V6.1
Predicted protein (1189 aa)
       
    0.613
PP1S81_123V6.1
Predicted protein (1194 aa)
       
    0.613
PP1S60_107V6.1
Predicted protein (665 aa)
         
  0.586
PP1S395_49V6.1
Annotation not available (182 aa)
       
 
  0.523
PP1S62_87V6.1
Actin-related protein 6 (446 aa)
       
    0.512
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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