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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S14_202V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S14_202V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S14_202V6.1Predicted protein (436 aa)    
Predicted Functional Partners:
PP1S28_211V6.1
annotation not available (436 aa)
     
 
  0.997
PP1S78_33V6.1
Predicted protein (246 aa)
     
 
  0.994
PP1S139_28V6.1
Predicted protein (911 aa)
     
 
  0.992
PP1S56_120V6.1
Predicted protein (604 aa)
     
 
  0.988
PP1S154_55V6.1
Predicted protein (540 aa)
     
 
  0.987
PP1S218_51V6.1
annotation not available (479 aa)
     
 
  0.986
PP1S99_235V6.1
Predicted protein (1092 aa)
     
 
  0.985
PP1S229_25V6.1
Predicted protein (2402 aa)
     
 
  0.985
PP1S269_91V6.1
Predicted protein (471 aa)
     
 
  0.981
PP1S74_54V6.1
Predicted protein (565 aa)
     
      0.976
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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