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STRINGSTRING
PP1S14_255V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S14_255V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S14_255V6.1Predicted protein (857 aa)    
Predicted Functional Partners:
PP1S177_14V6.2
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (184 aa)
     
      0.853
PP1S153_74V6.1
Predicted protein (133 aa)
     
      0.848
PP1S62_216V6.1
annotation not available (309 aa)
       
      0.848
PP1S240_76V6.1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier (90 aa)
       
      0.848
PP1S34_215V6.2
Predicted protein (467 aa)
       
      0.847
PP1S62_14V6.1
annotation not available (220 aa)
       
      0.844
PP1S241_84V6.1
Predicted protein (305 aa)
       
      0.844
PP1S166_108V6.3
Predicted protein (196 aa)
       
      0.844
PP1S50_182V6.1
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (132 aa)
       
      0.842
PP1S14_11V6.1
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (132 aa)
       
      0.842
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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