STRINGSTRING
PP1S14_283V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S14_283V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S14_283V6.1Predicted protein (148 aa)    
Predicted Functional Partners:
PP1S325_74V6.1
Predicted protein (1709 aa)
   
  0.978
PP1S100_44V6.1
Predicted protein (1783 aa)
   
  0.978
PP1S206_25V6.1
Annotation not available (458 aa)
     
  0.969
NFC1501
Nucleosome remodeling factor, p48 subunit (422 aa)
     
  0.969
HDA1504
Histone deacetylase (723 aa)
     
  0.962
HDA1505
Predicted protein (774 aa)
     
  0.962
HDA1506
Histone deacetylase (431 aa)
     
  0.962
SDG1509
Trithorax-like protein, histone-lysine N-methyltransferase (1832 aa)
   
  0.957
SDG1511
Trithorax-like protein, histone-lysine N-methyltransferase (1103 aa)
   
  0.957
PP1S47_35V6.1
Annotation not available (1301 aa)
   
  0.957
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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