• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S14_313V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S14_313V6.1" - Carboxypeptidase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S14_313V6.1Carboxypeptidase; Belongs to the peptidase S10 family (545 aa)    
Predicted Functional Partners:
PP1S1362_2V6.1
Predicted protein (305 aa)
     
 
  0.588
PP1S51_66V6.1
annotation not available (818 aa)
           
  0.530
PP1S51_65V6.1
annotation not available (140 aa)
           
  0.530
PP1S274_81V6.1
annotation not available (237 aa)
           
  0.530
PP1S274_80V6.1
Predicted protein (761 aa)
           
  0.530
PP1S52_256V6.1
Predicted protein (427 aa)
           
  0.509
PP1S15_293V6.1
annotation not available (364 aa)
           
  0.509
PP1S11890_1V6.1
Predicted protein; Alkaline phosphatase ; Belongs to the alkaline phosphatase family (223 aa)
     
   
  0.505
PP1S35_174V6.1
Predicted protein (2426 aa)
           
  0.505
PP1S74_201V6.1
Predicted protein (462 aa)
           
  0.504
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]