STRINGSTRING
Mcb1 protein (Physcomitrella patens) - STRING interaction network
"Mcb1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mcb1Predicted protein (414 aa)    
Predicted Functional Partners:
PP1S79_171V6.1
Predicted protein (416 aa)
     
  0.998
PP1S36_183V6.1
Predicted protein (416 aa)
     
  0.998
PP1S243_67V6.1
Predicted protein (416 aa)
     
  0.998
PP1S147_100V6.1
Predicted protein (412 aa)
     
  0.998
PP1S4_277V6.1
Predicted protein (446 aa)
     
  0.997
PP1S12_207V6.1
Predicted protein (446 aa)
     
  0.997
PP1S109_234V6.1
Predicted protein (446 aa)
     
  0.997
PP1S3_23V6.1
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (227 aa)
     
  0.997
PP1S68_29V6.1
Predicted protein (267 aa)
     
  0.997
PP1S48_71V6.1
Predicted protein (267 aa)
     
  0.997
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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