STRINGSTRING
PP1S150_15V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S150_15V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S150_15V6.1Predicted protein (312 aa)    
Predicted Functional Partners:
PP1S230_64V6.1
Annotation not available (569 aa)
       
  0.833
PP1S125_58V6.2
Predicted protein (570 aa)
       
  0.833
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
         
  0.791
PP1S135_25V6.1
Aminoimidazole ribonucleotide carboxylase (598 aa)
         
  0.789
PP1S286_5V6.1
Predicted protein (598 aa)
   
   
  0.676
PP1S175_104V6.1
Predicted protein (616 aa)
   
   
  0.676
PP1S54_48V6.2
Predicted protein (522 aa)
         
  0.668
PP1S80_151V6.1
DNA-directed RNA polymerase alpha chain (525 aa)
   
   
  0.663
PP1S98_29V6.2
Annotation not available (343 aa)
       
      0.657
PP1S823_1V6.1
Predicted protein (576 aa)
       
      0.657
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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