STRINGSTRING
PP1S150_16V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S150_16V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S150_16V6.1Predicted protein (763 aa)    
Predicted Functional Partners:
PP1S314_33V6.1
Predicted protein (334 aa)
     
  0.994
PP1S392_16V6.1
Predicted protein (316 aa)
     
  0.993
PP1S124_67V6.1
Predicted protein (316 aa)
     
  0.993
PP1S271_46V6.1
Annotation not available (313 aa)
     
 
  0.974
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
       
      0.921
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
       
      0.921
PP1S127_24V6.1
Predicted protein (277 aa)
     
 
  0.878
PP1S26_47V6.1
Predicted protein; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (394 aa)
     
 
  0.875
PP1S223_105V6.3
Predicted protein (398 aa)
     
 
  0.860
PP1S59_117V6.1
Predicted protein (402 aa)
     
 
  0.857
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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