STRINGSTRING
PP1S150_25V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S150_25V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S150_25V6.1Predicted protein (158 aa)    
Predicted Functional Partners:
PP1S5_15V6.1
Lon protease homolog (804 aa)
       
      0.999
PP1S23_71V6.1
Predicted protein (390 aa)
       
 
  0.956
PP1S2_25V6.1
Predicted protein (1092 aa)
       
 
  0.938
PP1S7_399V6.1
Predicted protein; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (93 aa)
     
      0.924
PP1S36_271V6.1
Predicted protein; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (91 aa)
     
      0.924
PP1S79_225V6.1
Predicted protein (624 aa)
       
      0.919
PP1S5_17V6.1
Annotation not available (205 aa)
       
      0.919
PP1S58_200V6.2
Predicted protein (646 aa)
       
      0.919
PP1S29_103V6.1
Lon protease homolog 2, peroxisomal ; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import (920 aa)
       
      0.919
PP1S357_37V6.1
Predicted protein (775 aa)
       
 
  0.453
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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