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SWDC1501 protein (Physcomitrella patens) - STRING interaction network
"SWDC1501" - WD40 repeat protein, COMPASS complex protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWDC1501WD40 repeat protein, COMPASS complex protein (318 aa)    
Predicted Functional Partners:
PP1S47_35V6.1
annotation not available (1301 aa)
     
 
  0.864
PP1S223_92V6.1
annotation not available (1289 aa)
     
 
  0.864
HMTA1501
Histone H3 methyltransferase complex, subunit CPS60/ASH2/BRE2 (638 aa)
     
 
  0.850
HMTA1502
annotation not available (338 aa)
     
 
  0.850
PP1S241_103V6.1
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (535 aa)
     
 
  0.848
PP1S419_39V6.1
Predicted protein (548 aa)
     
      0.846
PP1S70_189V6.1
annotation not available (310 aa)
     
 
  0.837
SWDA1501
annotation not available (407 aa)
     
 
  0.837
PP1S143_120V6.1
annotation not available (154 aa)
     
 
  0.837
PP1S138_31V6.1
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (534 aa)
     
      0.836
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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