STRINGSTRING
PP1S152_115V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S152_115V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S152_115V6.1Predicted protein (551 aa)    
Predicted Functional Partners:
PP1S13_388V6.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family (639 aa)
   
   
  0.596
PP1S76_8V6.2
Predicted protein; Belongs to the glycosyl hydrolase 1 family (580 aa)
           
  0.593
PP1S138_14V6.1
Predicted protein; Belongs to the glycosyl hydrolase 1 family (538 aa)
           
  0.593
PP1S110_112V6.1
Predicted protein; Belongs to the glycosyl hydrolase 1 family (535 aa)
           
  0.593
PP1S40_9V6.1
Malate synthase ; Belongs to the malate synthase family (559 aa)
   
   
  0.576
PP1S431_36V6.1
Predicted protein (296 aa)
         
  0.563
PP1S31_106V6.1
Predicted protein (326 aa)
         
  0.563
PP1S58_147V6.1
annotation not available (1356 aa)
         
  0.542
PP1S95_81V6.2
Predicted protein (518 aa)
         
  0.535
PP1S140_17V6.1
Predicted protein (476 aa)
         
  0.535
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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