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STRINGSTRING
PP1S152_130V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S152_130V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S152_130V6.1Predicted protein (262 aa)    
Predicted Functional Partners:
PP1S260_17V6.4
Predicted protein (411 aa)
         
  0.619
PP1S1_158V6.1
Uncharacterized protein (339 aa)
         
  0.619
PP1S408_12V6.1
Predicted protein (252 aa)
           
  0.566
PP1S17_341V6.1
annotation not available (948 aa)
           
  0.562
PP1S55_131V6.1
Predicted protein (498 aa)
 
     
  0.550
PP1S302_37V6.1
NADPH-adrenodoxin oxidoreductase, mitochondrial (529 aa)
           
  0.532
PP1S39_120V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (692 aa)
   
   
  0.531
PP1S188_11V6.1
Predicted protein (328 aa)
           
  0.519
PP1S47_23V6.1
Chorismate mutase (316 aa)
           
  0.508
PP1S142_106V6.1
Predicted protein (488 aa)
           
  0.508
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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