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STRINGSTRING
LAL1 protein (Physcomitrella patens) - STRING interaction network
LAL1 AtLAF1/3-like protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAL1LAL1 AtLAF1/3-like protein (586 aa)    
Predicted Functional Partners:
PP1S9535_1V6.1
Predicted protein (364 aa)
         
  0.819
PP1S8029_1V6.1
Predicted protein (251 aa)
         
  0.819
PP1S35_152V6.1
annotation not available (1073 aa)
           
  0.531
PP1S188_92V6.2
annotation not available (1186 aa)
           
  0.531
PP1S112_221V6.1
Predicted protein (983 aa)
           
  0.531
PP1S64_57V6.1
Predicted protein (471 aa)
           
  0.508
PP1S164_50V6.1
Predicted protein (789 aa)
           
  0.508
PP1S80_9V6.1
Predicted protein (587 aa)
           
  0.503
PP1S311_75V6.1
Predicted protein (595 aa)
           
  0.503
PP1S203_89V6.1
annotation not available (157 aa)
           
  0.483
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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