• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S152_51V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S152_51V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S152_51V6.1annotation not available (304 aa)    
Predicted Functional Partners:
PP1S43_205V6.1
Predicted protein (225 aa)
       
 
  0.999
PP1S114_147V6.1
Predicted protein (374 aa)
   
 
0.968
PP1S111_158V6.1
Predicted protein (73 aa)
     
 
  0.909
PP1S81_123V6.1
Predicted protein (1194 aa)
 
 
  0.869
PP1S88_186V6.1
Predicted protein (1189 aa)
 
 
  0.868
PP1S26_204V6.2
Predicted protein (869 aa)
           
  0.855
PP1S69_201V6.1
Predicted protein (1194 aa)
       
      0.847
PP1S53_181V6.1
annotation not available (1595 aa)
       
      0.847
PP1S74_182V6.1
Predicted protein (122 aa)
     
 
  0.754
PP1S59_1V6.1
Uncharacterized protein (990 aa)
     
   
  0.748
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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