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PP1S152_64V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S152_64V6.1" - 50S ribosomal protein L20 in Physcomitrella patens
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S152_64V6.150S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (113 aa)    
Predicted Functional Partners:
rpl16
Ribosomal protein L16 (561 aa)
   
  0.999
PP1S345_41V6.1
50S ribosomal protein L35 (126 aa)
   
  0.995
PP1S324_20V6.1
50S ribosomal protein L35 (126 aa)
   
  0.995
PP1S19_202V6.1
Predicted protein (188 aa)
 
  0.991
PP1S170_45V6.1
Predicted protein (163 aa)
   
  0.990
PP1S167_18V6.1
Predicted protein (187 aa)
   
  0.990
PP1S84_273V6.1
Predicted protein (703 aa)
   
  0.987
PP1S8328_1V6.1
Predicted protein (375 aa)
   
  0.987
PP1S400_36V6.1
Predicted protein (685 aa)
   
  0.987
PP1S34_213V6.1
Predicted protein (693 aa)
   
  0.987
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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