STRINGSTRING
PP1S153_114V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S153_114V6.1" - Annotation not available in Physcomitrella patens
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S153_114V6.1Annotation not available (1016 aa)    
Predicted Functional Partners:
PP1S265_31V6.1
Annotation not available (2815 aa)
     
 
  0.920
PP1S275_20V6.1
Predicted protein (1058 aa)
     
      0.914
PP1S196_105V6.1
Annotation not available (1014 aa)
   
   
  0.856
PP1S137_132V6.1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1008 aa)
   
   
  0.856
PP1S93_66V6.1
Annotation not available (890 aa)
   
 
  0.699
PP1S222_3V6.1
Annotation not available (857 aa)
   
 
  0.699
PP1S152_88V6.1
Predicted protein (1174 aa)
   
 
  0.699
PP1S243_58V6.1
Predicted protein (1315 aa)
   
 
0.671
PP1S232_56V6.1
Annotation not available (1230 aa)
   
 
0.671
PP1S128_34V6.1
Annotation not available (871 aa)
   
 
0.671
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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