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PP1S153_72V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S153_72V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S153_72V6.1Predicted protein; Belongs to the FBPase class 1 family (425 aa)    
Predicted Functional Partners:
PP1S56_223V6.1
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family (476 aa)
   
   
  0.950
PP1S223_26V6.1
Phosphoglycerate kinase ; Belongs to the phosphoglycerate kinase family (498 aa)
   
   
  0.950
PP1S223_16V6.1
Phosphoglycerate kinase ; Belongs to the phosphoglycerate kinase family (611 aa)
   
   
  0.950
PP1S201_82V6.1
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family (475 aa)
   
   
  0.950
PP1S299_3V6.1
Phosphoribulokinase (423 aa)
     
   
  0.947
PP1S228_12V6.1
annotation not available (191 aa)
     
   
  0.947
PP1S20_273V6.1
Phosphoribulokinase (426 aa)
     
   
  0.947
PP1S132_175V6.1
Phosphoribulokinase (423 aa)
     
   
  0.947
PP1S86_156V6.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (406 aa)
   
   
  0.945
PP1S264_71V6.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (406 aa)
   
   
  0.945
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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