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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S154_14V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S154_14V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S154_14V6.1annotation not available (729 aa)    
Predicted Functional Partners:
PP1S267_72V6.1
Predicted protein (720 aa)
     
 
  0.962
PP1S6_203V6.1
annotation not available (854 aa)
     
 
  0.946
PP1S20_156V6.1
annotation not available (187 aa)
     
 
  0.932
PP1S19_57V6.1
annotation not available (478 aa)
     
 
  0.932
PP1S47_85V6.1
Predicted protein (595 aa)
     
   
  0.887
PP1S277_64V6.1
annotation not available (835 aa)
     
        0.885
PP1S221_55V6.1
annotation not available (467 aa)
     
        0.885
PP1S1_202V6.1
Uncharacterized protein (371 aa)
     
        0.885
PP1S139_5V6.1
Predicted protein (351 aa)
     
        0.885
PP1S168_77V6.1
Protein BCCIP homolog; Belongs to the BCP1 family (315 aa)
     
        0.884
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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