• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S156_14V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S156_14V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S156_14V6.1annotation not available (1141 aa)    
Predicted Functional Partners:
PP1S14_84V6.1
Predicted protein (227 aa)
           
  0.690
PP1S351_7V6.1
annotation not available (578 aa)
           
  0.613
PP1S9_248V6.1
annotation not available (314 aa)
           
  0.604
PP1S238_32V6.1
Predicted protein (391 aa)
           
  0.524
PP1S236_47V6.1
annotation not available (344 aa)
           
  0.524
PP1S41_201V6.1
annotation not available (707 aa)
           
  0.523
CPC1505
Structural maintenance of chromosomes protein; Condensin complex component SMC3 (1171 aa)
           
  0.522
CPC1501
Structural maintenance of chromosomes protein (1258 aa)
           
  0.522
PP1S248_24V6.1
Predicted protein (196 aa)
           
  0.522
PP1S199_157V6.1
annotation not available (1204 aa)
           
  0.522
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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