STRINGSTRING
PP1S158_124V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S158_124V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S158_124V6.1Predicted protein (216 aa)    
Predicted Functional Partners:
ARP1509
Actin-related protein Arp4 (438 aa)
       
      0.878
ARP1508
Actin-related protein ARP4 (435 aa)
       
      0.878
PP1S9_14V6.1
Annotation not available (53 aa)
     
 
  0.688
PP1S360_40V6.1
Annotation not available (61 aa)
     
 
  0.688
CHR1522
SWI/SNF class chromatin remodeling complex protein (2173 aa)
     
 
  0.688
CHR1520
SWI/SNF class chromatin remodeling complex protein (2426 aa)
     
 
  0.688
CHR1534
SWI/SNF class chromatin remodeling complex protein (2428 aa)
     
 
  0.688
CHC1501
SWI/SNF transcription activation complex subunit (487 aa)
       
      0.642
CHC1502
SWI/SNF transcription activation complex subunit (473 aa)
       
      0.642
PP1S173_113V6.1
Annotation not available (96 aa)
       
      0.642
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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