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PP1S158_40V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S158_40V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S158_40V6.1Predicted protein (2275 aa)    
Predicted Functional Partners:
PP1S15_270V6.1
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA (300 aa)
   
  0.997
PP1S40_304V6.1
Predicted protein (393 aa)
   
  0.986
PP1S54_77V6.1
Predicted protein (300 aa)
   
 
  0.985
PP1S199_4V6.1
Predicted protein (542 aa)
   
 
  0.956
PP1S27_140V6.1
annotation not available (453 aa)
   
  0.954
PP1S234_46V6.1
Predicted protein (458 aa)
   
  0.954
PP1S40_9V6.1
Malate synthase ; Belongs to the malate synthase family (559 aa)
     
 
  0.920
ALDH6A
MM-ALDH (574 aa)
     
 
  0.912
PP1S7_156V6.1
Uncharacterized protein (424 aa)
     
 
  0.903
PP1S63_54V6.2
Predicted protein (423 aa)
     
 
  0.903
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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