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STRINGSTRING
PP1S15_13V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S15_13V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S15_13V6.2Predicted protein (366 aa)    
Predicted Functional Partners:
RabD12
Rab1/RabD-family small GTPase (203 aa)
     
 
  0.627
RabD11
Rab1/RabD-family small GTPase (206 aa)
     
 
  0.627
PP1S201_3V6.1
annotation not available (244 aa)
     
 
  0.627
PP1S130_197V6.1
Predicted protein (396 aa)
     
   
  0.622
PP1S47_89V6.1
Predicted protein (174 aa)
           
  0.611
PP1S141_31V6.1
Predicted protein (174 aa)
           
  0.611
PRMT1502
Protein arginine N-methyltransferase ; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family (370 aa)
     
      0.607
PRMT1501
Protein arginine N-methyltransferase ; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family (385 aa)
     
      0.607
PRMT1507
annotation not available (267 aa)
     
      0.607
PP1S285_18V6.1
Predicted protein (418 aa)
     
   
  0.601
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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