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STRINGSTRING
PP1S15_157V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S15_157V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S15_157V6.1annotation not available (261 aa)    
Predicted Functional Partners:
PP1S47_241V6.1
Predicted protein (108 aa)
   
   
  0.953
PP1S36_299V6.1
Predicted protein (271 aa)
   
   
  0.953
PP1S4_450V6.1
Predicted protein (207 aa)
   
   
  0.950
PP1S83_182V6.1
Ribosomal protein ; Belongs to the bacterial ribosomal protein bL36 family (130 aa)
     
   
  0.934
PP1S29_188V6.1
Predicted protein (251 aa)
   
      0.908
PP1S104_119V6.1
Predicted protein (245 aa)
   
      0.908
PP1S1_793V6.3
annotation not available (291 aa)
     
   
  0.885
PP1S190_85V6.1
Predicted protein (256 aa)
   
        0.885
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
   
        0.885
PP1S104_30V6.1
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (186 aa)
     
   
  0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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